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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Current Computer-Aided Drug Design</journal-id><journal-title-group><journal-title xml:lang="en">Current Computer-Aided Drug Design</journal-title><trans-title-group xml:lang="ru"><trans-title>Current Computer-Aided Drug Design</trans-title></trans-title-group></journal-title-group><issn publication-format="print">1573-4099</issn><issn publication-format="electronic">1875-6697</issn><publisher><publisher-name xml:lang="en">Bentham Science</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">644095</article-id><article-id pub-id-type="doi">10.2174/1573409919666230525122447</article-id><article-categories><subj-group subj-group-type="toc-heading"><subject>Chemistry</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Predicting the Mechanism of Tiannanxing-shengjiang Drug Pair in Treating Pain Using Network Pharmacology and Molecular Docking Technology</article-title></title-group><contrib-group><contrib contrib-type="author"><name><surname>Wang</surname><given-names>Boning</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name><surname>Wang</surname><given-names>Yanlei</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name><surname>Mao</surname><given-names>Peng</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name><surname>Zhang</surname><given-names>Yi</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><name><surname>Li</surname><given-names>Yifan</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><name><surname>Liu</surname><given-names>Xing</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff4"/></contrib><contrib contrib-type="author"><name><surname>Fan</surname><given-names>Bifa</given-names></name><email>info@benthamscience.net</email><xref ref-type="aff" rid="aff3"/></contrib></contrib-group><aff id="aff1"><institution>, Graduate School of Beijing University of Chinese Medicine</institution></aff><aff id="aff2"><institution>Department of Pain Medicine, The First Affiliated Hospital of Tsinghua University</institution></aff><aff id="aff3"><institution>Department of Pain Medicine, The First Affiliated Hospital of Tsinghua University,</institution></aff><aff id="aff4"><institution>, raduate School of Beijing University of Chinese Medicine</institution></aff><pub-date date-type="pub" iso-8601-date="2024-05-01" publication-format="electronic"><day>01</day><month>05</month><year>2024</year></pub-date><volume>20</volume><issue>5</issue><issue-title xml:lang="ru"/><fpage>463</fpage><lpage>473</lpage><history><date date-type="received" iso-8601-date="2025-01-07"><day>07</day><month>01</month><year>2025</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2024, Bentham Science Publishers</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="en">Bentham Science Publishers</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/></permissions><self-uri xlink:href="https://rjeid.com/1573-4099/article/view/644095">https://rjeid.com/1573-4099/article/view/644095</self-uri><abstract xml:lang="en"><p id="idm46041443786608">Objective:This study aimed to analyze the potential targets and mechanism of the Tiannanxing-shengjiang drug pair in pain treatment using network pharmacology and molecular docking technology.</p><p id="idm46041443790608">Methods:The active components and target proteins of Tiannanxing-Shengjiang were obtained from the TCMSP database. The pain-related genes were acquired from the DisGeNET database. The common target genes between Tiannanxing-Shengjiang and pain were identified and subjected to the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genome (KEGG) pathway enrichment analyses on the DAVID website. AutoDockTools and molecular dynamics simulation analysis were used to assess the binding of the components with the target proteins.</p><p id="idm46041443794576">Results:Ten active components were screened out, such as stigmasterol, β-sitosterol, and dihydrocapsaicin. A total of 63 common targets between the drug and pain were identified. GO analysis showed the targets to be mainly associated with biological processes, such as inflammatory response and forward regulation of the EKR1 and EKR2 cascade. KEGG analysis revealed 53 enriched pathways, including pain-related calcium signaling, cholinergic synaptic signaling, and serotonergic pathway. Five compounds and 7 target proteins showed good binding affinities. These data suggest that Tiannanxing-shengjiang may alleviate pain through specific targets and signaling pathways.</p><p id="idm46041443799632">Conclusion:The active ingredients in Tiannanxing-shengjiang might alleviate pain by regulating genes, such as CNR1, ESR1, MAPK3, CYP3A4, JUN, and HDAC1 through the signaling pathways, including intracellular calcium ion conduction, cholinergic prominent signaling, and cancer signaling pathway.</p></abstract><kwd-group xml:lang="en"><kwd>Molecular docking technology</kwd><kwd>network pharmacology</kwd><kwd>pain</kwd><kwd>Tiannanxing</kwd><kwd>Shengjiang</kwd><kwd>signaling pathway</kwd><kwd>cholinergic synaptic signaling.</kwd></kwd-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Mao, P.; Lin, X.Q.; Li, Y.F.; Wu, Y. Chronic secondary musculoskeletal pain. Chinese J. Pain Med., 2021, 27(5), 323-326. doi: 10.3969/j.issn.1006-9852.2021.05.002</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Li, Y.F.; Fan, B.F.; Li, C.R.; Wang, B.N.; Li, M.Q.; Xu, Y.M.; Wu, D.S.; Fu, Z.J.; Chen, Y.Z.; Mao, P. Efficacy and safety of chuanxiong qingnao granule for the treatment of migraine: A multicenter randomized, double-blind, placebo-controlled prospective clinical trial. Chinese J. Pain Med., 2019, 25(10), 739-743,748.</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Scholl, L.; Seth, P.; Kariisa, M.; Wilson, N.; Baldwin, G. Drug and opioid-involved overdose deaths - United States, 20132017. MMWR Morb. Mortal. Wkly. Rep., 2018, 67(5152), 1419-1427. doi: 10.15585/mmwr.mm675152e1 PMID: 30605448</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>Duan, X.C.; Huang, S.; Peng, D.Y.; Han, L.; Wang, X.L.; Wang, Y.C.; Pan, L.Y. Application of network pharmacology in the study of traditional Chinese medicine formula. Zhongguo Yaolixue Tongbao, 2020, 36(3), 303-308.</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Hao, D.C.; Xiao, P.G. Network pharmacology: A Rosetta Stone for traditional Chinese medicine. Drug Dev. Res., 2014, 75(5), 299-312. doi: 10.1002/ddr.21214 PMID: 25160070</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Chen, R.M.; Jiang, M.; Yin, S.M.; Qiu, J.C.; Bian, H.M. Impact of compound nanxing pain paste on analgesia and the expression of C-Fos in model rats with formaldehyde-induced inflammatory pain. World J. Integrat. Trad. West. Med., 2008, 3(8), 454-456.</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Mao, Z.J.; Zhang, C.A.; Wu, F.; Wei, P.K. Effects of aqueous extract of chinese medicine raw pinellia and nanxing on human gastric cancer cells BGC823. Xiandai Shengwu Yixue Jinzhan, 2011, (10), 1861-1880.</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Kang, F.; Yan, W.J.; Shi, Z.T.; Qi, F.Y.; Huang, X.J. Experimental observation of analgesic effect of ginger and exploration of its mechansim. Shaanxi Med. J., 2010, 39(8), 954-955.</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Zhang, W.; Chen, Y.; Jiang, H.; Yang, J.; Wang, Q.; Du, Y.; Xu, H. Integrated strategy for accurately screening biomarkers based on metabolomics coupled with network pharmacology. Talanta, 2020, 211, 120710. doi: 10.1016/j.talanta.2020.120710 PMID: 32070601</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Gfeller, D.; Grosdidier, A.; Wirth, M.; Daina, A.; Michielin, O.; Zoete, V. Swiss Target Prediction: A web server for target prediction of bioactive small molecules. Nucleic Acids Res., 2014, 42(Web Server issue), W32-W38. doi: 10.1093/nar/gku293</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>UniProt Consortium. UniProt: A worldwide hub of protein knowledge. Nucleic Acids Res., 2019, 47(D1), D506-D515. doi: 10.1093/nar/gky1049 PMID: 30395287</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Shannon, P.; Markiel, A.; Ozier, O.; Baliga, N.S.; Wang, J.T.; Ramage, D.; Amin, N.; Schwikowski, B.; Ideker, T. Cytoscape: A software environment for integrated models of biomolecular interaction networks. Genome Res., 2003, 13(11), 2498-2504. doi: 10.1101/gr.1239303 PMID: 14597658</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>von Mering, C.; Jensen, L.J.; Snel, B.; Hooper, S.D.; Krupp, M.; Foglierini, M.; Jouffre, N.; Huynen, M.A.; Bork, P. STRING: Known and predicted protein-protein associations, integrated and transferred across organisms. Nucleic Acids Res., 2004, 33(Database issue), D433-D437. doi: 10.1093/nar/gki005 PMID: 15608232</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>Shen, F.; Yongrong, W.; Kuang, G.; Zhao, Y.; Xia, Y.; Deng, D. Potential molecular mechanism of Zhuifeng Tougu capsule in treating rheumatoid arthritis and osteoarthritis based on network pharmacology and molecular docking technology. World Sci. Technol.Modern. Trad. Chinese Med., 2021, 22(10), 3526-3537.</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Huang, D.W.; Sherman, B.T.; Lempicki, R.A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc., 2009, 4(1), 44-57. doi: 10.1038/nprot.2008.211 PMID: 19131956</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Rajeswari, M.; Santhi, N.; Bhuvaneswari, V. Pharmacophore and virtual screening of JAK3 inhibitors. Bioinformation, 2014, 10(3), 157-163. doi: 10.6026/97320630010157 PMID: 24748756</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Liu, Y.B.; Pan, N.S.; Mo, Y.M. A review of the research progress of the chinese medicine tiannanxing. Sci. Technol. West China, 2015, 14(6), 106-107, 150.</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Nadaf, A.; Zanan, R. Economical importance of indian pandanus species. In: Indian Pandanaceae - An Overview; Springer India, 2012; pp. 127-137. doi: 10.1007/978-81-322-0753-5_7</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Pandith, H.; Zhang, X.; Thongpraditchote, S.; Wongkrajang, Y.; Gritsanapan, W.; Baek, S.J. Effect of Siam weed extract and its bioactive component scutellarein tetramethyl ether on anti-inflammatory activity through NF-κB pathway. J. Ethnopharmacol., 2013, 147(2), 434-441. doi: 10.1016/j.jep.2013.03.033 PMID: 23535395</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Walker, C.I.B.; Oliveira, S.M.; Tonello, R.; Rossato, M.F.; da Silva Brum, E.; Ferreira, J.; Trevisan, G. Anti-nociceptive effect of stigmasterol in mouse models of acute and chronic pain. Naunyn Schmiedebergs Arch. Pharmacol., 2017, 390(11), 1163-1172. doi: 10.1007/s00210-017-1416-x PMID: 28821921</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Mizerska-Wasiak, M.; Małdyk, J.; Rybi-Szumińska, A.; Wasilewska, A.; Miklaszewska, M.; Pietrzyk, J.; Firszt-Adamczyk, A.; Stankiewicz, R.; Bieniaś, B.; Zajączkowska, M.; Gadomska-Prokop, K.; Grenda, R.; Pukajło-Marczyk, A.; Zwolińska, D.; Szczepańska, M.; Turczyn, A.; Roszkowska-Blaim, M. Relationship between serum IgA/C3 ratio and severity of histological lesions using the Oxford classification in children with IgA nephropathy. Pediatr. Nephrol., 2015, 30(7), 1113-1120. doi: 10.1007/s00467-014-3024-z PMID: 25549975</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Amsalem, M.; Poilbout, C.; Ferracci, G.; Delmas, P.; Padilla, F. Membrane cholesterol depletion as a trigger of Nav1.9 channel‐mediated inflammatory pain. EMBO J., 2018, 37(8), e97349. doi: 10.15252/embj.201797349 PMID: 29459435</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Binzen, U.; Greffrath, W.; Hennessy, S.; Bausen, M.; Saaler-Reinhardt, S.; Treede, R.D. Co-expression of the voltage-gated potassium channel Kv1.4 with transient receptor potential channels (TRPV1 and TRPV2) and the cannabinoid receptor CB1 in rat dorsal root ganglion neurons. Neuroscience, 2006, 142(2), 527-539. doi: 10.1016/j.neuroscience.2006.06.020 PMID: 16889902</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Khasabova, I.A.; Khasabov, S.G.; Harding-Rose, C.; Coicou, L.G.; Seybold, B.A.; Lindberg, A.E.; Steevens, C.D.; Simone, D.A.; Seybold, V.S. A decrease in anandamide signaling contributes to the maintenance of cutaneous mechanical hyperalgesia in a model of bone cancer pain. J. Neurosci., 2008, 28(44), 11141-11152. doi: 10.1523/JNEUROSCI.2847-08.2008 PMID: 18971457</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Pernía-Andrade, A.J.; Kato, A.; Witschi, R.; Nyilas, R.; Katona, I.; Freund, T.F.; Watanabe, M.; Filitz, J.; Koppert, W.; Schüttler, J.; Ji, G.; Neugebauer, V.; Marsicano, G.; Lutz, B.; Vanegas, H.; Zeilhofer, H.U. Spinal endocannabinoids and CB1 receptors mediate C-fiber-induced heterosynaptic pain sensitization. Science, 2009, 325(5941), 760-764. doi: 10.1126/science.1171870 PMID: 19661434</mixed-citation></ref><ref id="B26"><label>26.</label><mixed-citation>Evrard, H.C. Estrogen synthesis in the spinal dorsal horn: a new central mechanism for the hormonal regulation of pain. Am. J. Physiol. Regul. Integr. Comp. Physiol., 2006, 291(2), R291-R299. doi: 10.1152/ajpregu.00930.2005 PMID: 16914420</mixed-citation></ref><ref id="B27"><label>27.</label><mixed-citation>Dolgikh, O.V.; Zaitseva, N.V.; Nosov, A.E.; Krivtsov, A.V.; Dianova, D.G.; Kazakova, O.A.; Otavina, E.A.; Alikina, I.N. Analysis of the role of carriership of polymorphic genotypes of ESR1, eNOS, and APOE4 genes in the development of arterial hypertension in men. Bull. Exp. Biol. Med., 2018, 164(6), 753-756. doi: 10.1007/s10517-018-4073-2 PMID: 29658078</mixed-citation></ref><ref id="B28"><label>28.</label><mixed-citation>Li, M.L.; Hong, Y.G. Mitogen-activated protein kinase and pain. Chinese J. Pain Med., 2010, 16(4), 241-244.</mixed-citation></ref><ref id="B29"><label>29.</label><mixed-citation>Chi, L.Q.; Lu, X.; Wang, L.; Liu, S.P.; Ding, N.; Zhang, H.Y.; e, W. Detection of cytochrome P450 3A4 gene polymorphism guides for labor analgesia with sufentanil medication. Beijing Da Xue Xue Bao, 2015, 47(4), 653-656. PMID: 26284404</mixed-citation></ref><ref id="B30"><label>30.</label><mixed-citation>Kharasch, E.D.; Whittington, D.; Hoffer, C. Influence of hepatic and intestinal cytochrome P4503A activity on the acute disposition and effects of oral transmucosal fentanyl citrate. Anesthesiology, 2004, 101(3), 729-737. doi: 10.1097/00000542-200409000-00022 PMID: 15329598</mixed-citation></ref><ref id="B31"><label>31.</label><mixed-citation>Yan, X.T.; Xu, Y.; Cheng, X.L.; He, X.H.; Wang, Y.; Zheng, W.Z.; Zhao, Y.; Chen, H.; Wang, Y.L. SP1, MYC, CTNNB1, CREB1, JUN genes as potential therapy targets for neuropathic pain of brain. J. Cell. Physiol., 2019, 234(5), 6688-6695. doi: 10.1002/jcp.27413 PMID: 30478830</mixed-citation></ref><ref id="B32"><label>32.</label><mixed-citation>Wakabayashi, H.; Wakisaka, S.; Hiraga, T.; Hata, K.; Nishimura, R.; Tominaga, M.; Yoneda, T. Decreased sensory nerve excitation and bone pain associated with mouse Lewis lung cancer in TRPV1-deficient mice. J. Bone Miner. Metab., 2018, 36(3), 274-285. doi: 10.1007/s00774-017-0842-7 PMID: 28516219</mixed-citation></ref></ref-list></back></article>
