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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Epidemiology and Infectious Diseases</journal-id><journal-title-group><journal-title xml:lang="en">Epidemiology and Infectious Diseases</journal-title><trans-title-group xml:lang="ru"><trans-title>Эпидемиология и инфекционные болезни</trans-title></trans-title-group></journal-title-group><issn publication-format="print">3034-2007</issn><issn publication-format="electronic">3034-2015</issn><publisher><publisher-name xml:lang="en">Eco-Vector</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">50013</article-id><article-id pub-id-type="doi">10.17816/EID50013</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Reviews</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Научные обзоры</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Significance of interspecies and intraspecies interactions of microorganisms as a sub-organism level in the hierarchy of the epidemic process</article-title><trans-title-group xml:lang="ru"><trans-title>Значение межвидовых и внутривидовых взаимодействий микроорганизмов как суборганизменного уровня в иерархии эпидемического процесса</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-7008-3804</contrib-id><contrib-id contrib-id-type="scopus">57211917335</contrib-id><contrib-id contrib-id-type="spin">8049-7571</contrib-id><name-alternatives><name xml:lang="en"><surname>Yakovlev</surname><given-names>Anatoly A.</given-names></name><name xml:lang="ru"><surname>Яковлев</surname><given-names>Анатолий Александрович</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>MD, PhD, Professor</p></bio><bio xml:lang="ru"><p>заведующий лабораторией молекулярной эпидемиологии и экологии патогенных бактерий; д.м.н., профессор, профессор кафедры эпидемиологии и военной эпидемиологии</p></bio><email>yakovlev-epid@yandex.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-1917-9189</contrib-id><contrib-id contrib-id-type="scopus">54792230300</contrib-id><contrib-id contrib-id-type="researcherid">A-2584-2012</contrib-id><contrib-id contrib-id-type="spin">5819-3561</contrib-id><name-alternatives><name xml:lang="en"><surname>Rakov</surname><given-names>Alexey V.</given-names></name><name xml:lang="ru"><surname>Раков</surname><given-names>Алексей Владимирович</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>MD, PhD</p></bio><bio xml:lang="ru"><p>к.м.н., старший научный сотрудник лаборатории молекулярной эпидемиологии и экологии патогенных бактерий</p></bio><email>alexeyrakov@mail.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-5507-9751</contrib-id><contrib-id contrib-id-type="scopus">57201197327</contrib-id><contrib-id contrib-id-type="spin">6872-5720</contrib-id><name-alternatives><name xml:lang="en"><surname>Pozdeeva</surname><given-names>Ekaterina S.</given-names></name><name xml:lang="ru"><surname>Поздеева</surname><given-names>Екатерина Сергеевна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>MD, PhD</p></bio><bio xml:lang="ru"><p>к.м.н., доцент кафедры эпидемиологии и военной эпидемиологии</p></bio><email>ka1383@mail.ru</email><xref ref-type="aff" rid="aff2"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Somov Institute of Epidemiology and Microbiology</institution></aff><aff><institution xml:lang="ru">Научно-исследовательский институт эпидемиологии и микробиологии имени Г.П. Сомова</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">Pacific State Medical University</institution></aff><aff><institution xml:lang="ru">Тихоокеанский государственный медицинский университет</institution></aff></aff-alternatives><pub-date date-type="preprint" iso-8601-date="2020-12-06" publication-format="electronic"><day>06</day><month>12</month><year>2020</year></pub-date><pub-date date-type="pub" iso-8601-date="2020-06-15" publication-format="electronic"><day>15</day><month>06</month><year>2020</year></pub-date><volume>25</volume><issue>3</issue><issue-title xml:lang="en"/><issue-title xml:lang="ru"/><fpage>118</fpage><lpage>130</lpage><history><date date-type="received" iso-8601-date="2020-11-12"><day>12</day><month>11</month><year>2020</year></date><date date-type="accepted" iso-8601-date="2020-11-28"><day>28</day><month>11</month><year>2020</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2020, Eco-vector</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2020, ООО "Эко-вектор"</copyright-statement><copyright-year>2020</copyright-year><copyright-holder xml:lang="en">Eco-vector</copyright-holder><copyright-holder xml:lang="ru">ООО "Эко-вектор"</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/></permissions><self-uri xlink:href="https://rjeid.com/1560-9529/article/view/50013">https://rjeid.com/1560-9529/article/view/50013</self-uri><abstract xml:lang="en"><p>Currently, the epidemic process is considered a complex multilevel system, which involves the suborganismic (i.e., tissue, cellular, and molecular), organismic, and socio-ecosystem (population). In the human population, many pathogenic microorganisms circulate and may cause disease in humans simultaneously. As a rule, they exist in an associated state – a universal phenomenon for the vast majority of representatives of the microworld. However, possible interrelationships between them and their reflection in the epidemic development process and its `manifestations, as a rule, has not been taken into account. In this study, based on an analysis of publications on the results of our own research by the authors and world literature, at the sub-organism level of the epidemic process there is an active inter- and intraspecies interaction among representatives of different types of microorganisms, realized through integration-competitive mechanisms. This interaction is reflected both at the organism and population levels of the epidemic process. Therefore, when conducting epidemiological studies, an integrative approach is needed to take into account processes happening at a suborganism level. Understanding that microorganisms actively interact with each other will significantly increase our ability to develop new approaches to protect organisms from infections, as well as adequately predict the occurrence and development of an epidemic.</p></abstract><trans-abstract xml:lang="ru"><p>В современный период эпидемический процесс рассматривают как сложную многоуровневую систему, включающую в себя суборганизменный (тканевой, клеточный, молекулярный), организменный и соцэкосистемный (популяционный) уровни. В человеческой популяции одновременно циркулируют и вызывают заболевания у людей множество патогенных микроорганизмов. Как правило, они существуют в ассоциированном состоянии ― универсальном явлении для подавляющего большинства представителей микромира. Тем не менее возможность взаимосвязей между ними и их отражения в развитии эпидемического процесса и его проявлениях, как правило, не учитывается. В представленной работе на основании анализа публикаций по результатам собственных исследований авторов и данных мировой литературы показано, что на суборганизменном уровне эпидемического процесса идёт активное меж- и внутривидовое взаимодействие между представителями разных видов микроорганизмов, реализуемое через интеграционно-конкурентные механизмы. Это взаимодействие находит отражение как на организменном, так и популяционном уровне эпидемического процесса. Именно поэтому эпидемиологические исследования требуют интеграционного подхода, учитывающего все процессы, проходящие на суборганизменном уровне. Понимание того обстоятельства, что микроорганизмы активно взаимодействуют между собой, существенно повысит наши возможности по разработке новых подходов к защите организма от инфекций, а также адекватному прогнозированию эпидемий и времени их развития.</p></trans-abstract><kwd-group xml:lang="en"><kwd>microorganisms</kwd><kwd>interaction</kwd><kwd>coinfection</kwd><kwd>epidemic process</kwd><kwd>integrative approach</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>микроорганизмы</kwd><kwd>взаимодействие</kwd><kwd>сочетанные инфекции</kwd><kwd>эпидемический процесс</kwd><kwd>интеграционный подход</kwd></kwd-group><funding-group/></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><citation-alternatives><mixed-citation xml:lang="en">Fernandez L, Mercader JM, Planas-Fèlix M, Torrents D. Adaptation to environmental factors shapes the organization of regulatory regions in microbial communities. 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